Solution
You can use PuTTY as the terminal emulator and run lsusb -t on the terminal. This command shows the topology of the USB devices in a tree format along with the information like bus, port, class, driver, and speed.
Example of the result is shown below:
If the usb-storage device shows 5000M, it means that the port operates as USB 3.0 while if it shows 480M, it means it is USB 2.0