Solution
It is not possible to see your specific queues in the project tree, as queues are a VI resource and are not shown in the project tree. What you can do, is add the queue VIs that you've use in the project dependencies, and the right click the VIs and choose
Find>>
Callers. You will see all VIs that have a queue function inside.

You can then manually find all the VIs that use the same queue and organize them together in a virtual folder in LabVIEW project.