Solution
The toolkit itself should mostly operate the same for CAN or CAN FD.
The only real difference is setting the different baud rate properties through the appropriate function calls.
CAN FD parameters could be defined at A2L file.
If their A2L file doesn't contain the correct physical layer parameters such as baud rates etc, then you can try to set them explicitly by calling
MC Set Property.vi. The snippet below shows how to set CAN FD properties dynamically. This code is based on
Multiple Measurement.vi example.